IL_7QWQ_062

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_062 not in the Motif Atlas

Geometric match to IL_7RQB_021

Geometric discrepancy: 0.1966

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7QWQ|1|5|C|1551
7QWQ|1|5|G|1552
7QWQ|1|5|A|1553
7QWQ|1|5|A|1554
7QWQ|1|5|G|1555
*
7QWQ|1|5|U|1572
7QWQ|1|5|G|1573
7QWQ|1|5|G|1574
7QWQ|1|5|A|1575
7QWQ|1|5|G|1576

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

L8

Chain R

60S ribosomal protein L19

Chain p

eL43