IL_7QWQ_070

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

AA*UUU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_070 not in the Motif Atlas

Geometric match to IL_6DLR_003

Geometric discrepancy: 0.1186

The information below is about IL_6DLR_003

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

68

Unit IDs

7QWQ|1|5|A|1737
7QWQ|1|5|A|1738
*
7QWQ|1|5|U|1790
7QWQ|1|5|U|1791
7QWQ|1|5|U|1792

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain D

Ribosomal_L18_c domain-containing protein

Chain I

60S ribosomal protein L10

Chain T

60S ribosomal protein L21