IL_7QWQ_119

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

7QWQ|1|5|A|3785, 7QWQ|1|5|C|3791

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWQ_119 not in the Motif Atlas

Homologous match to IL_8C3A_095

Geometric discrepancy: 0.2162

The information below is about IL_8C3A_095

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66080.1

Basepair signature

cWW-cWW-tSH-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7QWQ|1|5|C|3781
7QWQ|1|5|C|3782
7QWQ|1|5|A|3783
7QWQ|1|5|A|3784
7QWQ|1|5|A|3785
7QWQ|1|5|U|3786
7QWQ|1|5|G|3787
7QWQ|1|5|C|3788
7QWQ|1|5|C|3789
7QWQ|1|5|U|3790
7QWQ|1|5|C|3791
7QWQ|1|5|G|3792
*
7QWQ|1|5|C|3808
7QWQ|1|5|G|3809
7QWQ|1|5|C|3810
7QWQ|1|5|G|3811

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41