IL_7QWQ_172
3D structure
- PDB id
- 7QWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of ribosome nascent chain with SRP and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- GUUAGUAC*GGAAUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QWQ_172 not in the Motif Atlas
- Geometric match to IL_7A0S_007
- Geometric discrepancy: 0.1642
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7QWQ|1|7|G|71
7QWQ|1|7|U|72
7QWQ|1|7|U|73
7QWQ|1|7|A|74
7QWQ|1|7|G|75
7QWQ|1|7|U|76
7QWQ|1|7|A|77
7QWQ|1|7|C|78
*
7QWQ|1|7|G|98
7QWQ|1|7|G|99
7QWQ|1|7|A|100
7QWQ|1|7|A|101
7QWQ|1|7|U|102
7QWQ|1|7|A|103
7QWQ|1|7|C|104
Current chains
- Chain 7
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Ribosomal_L18_c domain-containing protein
- Chain F
- uL30
- Chain I
- 60S ribosomal protein L10
- Chain S
- 60S ribosomal protein L18a
- Chain T
- 60S ribosomal protein L21
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