3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGU*AC
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QWR_019 not in the Motif Atlas
Geometric match to IL_5J7L_249
Geometric discrepancy: 0.3348
The information below is about IL_5J7L_249
Detailed Annotation
Single stack bend
Broad Annotation
No text annotation
Motif group
IL_90729.1
Basepair signature
cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

7QWR|1|5|G|443
7QWR|1|5|G|444
7QWR|1|5|U|445
*
7QWR|1|5|A|1303
7QWR|1|5|C|1304

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain e
Ribosomal protein L32
Chain f
60S ribosomal protein L35a

Coloring options:


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