IL_7QWR_022

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUCC*GGC

Length

8 nucleotides

Bulged bases

7QWR|1|5|C|485

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_022 not in the Motif Atlas

Geometric match to IL_3TD0_005

Geometric discrepancy: 0.2906

The information below is about IL_3TD0_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

7QWR|1|5|G|482
7QWR|1|5|G|483
7QWR|1|5|U|484
7QWR|1|5|C|485
7QWR|1|5|C|486
*
7QWR|1|5|G|670
7QWR|1|5|G|671
7QWR|1|5|C|672

Current chains

Chain 5

28S rRNA

Nearby chains

Chain r

60S ribosomal protein L28