IL_7QWR_108

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

7QWR|1|5|A|3785, 7QWR|1|5|C|3791

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_108 not in the Motif Atlas

Geometric match to IL_5TBW_090

Geometric discrepancy: 0.2296

The information below is about IL_5TBW_090

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66080.1

Basepair signature

cWW-cWW-tSH-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7QWR|1|5|C|3781
7QWR|1|5|C|3782
7QWR|1|5|A|3783
7QWR|1|5|A|3784
7QWR|1|5|A|3785
7QWR|1|5|U|3786
7QWR|1|5|G|3787
7QWR|1|5|C|3788
7QWR|1|5|C|3789
7QWR|1|5|U|3790
7QWR|1|5|C|3791
7QWR|1|5|G|3792
*
7QWR|1|5|C|3808
7QWR|1|5|G|3809
7QWR|1|5|C|3810
7QWR|1|5|G|3811

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41