IL_7QWR_138

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUAUG*CGAAG

Length

11 nucleotides

Bulged bases

7QWR|1|5|U|4634, 7QWR|1|5|U|4636

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_138 not in the Motif Atlas

Geometric match to IL_5TBW_118

Geometric discrepancy: 0.2787

The information below is about IL_5TBW_118

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

7QWR|1|5|U|4632
7QWR|1|5|G|4633
7QWR|1|5|U|4634
7QWR|1|5|A|4635
7QWR|1|5|U|4636
7QWR|1|5|G|4637
*
7QWR|1|5|C|4662
7QWR|1|5|G|4663
7QWR|1|5|A|4664
7QWR|1|5|A|4665
7QWR|1|5|G|4666

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

Ribosomal protein L24

Chain d

Ribosomal protein L31