IL_7QWS_108

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

7QWS|1|5|A|3785, 7QWS|1|5|C|3791

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_108 not in the Motif Atlas

Geometric match to IL_5TBW_090

Geometric discrepancy: 0.2413

The information below is about IL_5TBW_090

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66080.1

Basepair signature

cWW-cWW-tSH-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7QWS|1|5|C|3781
7QWS|1|5|C|3782
7QWS|1|5|A|3783
7QWS|1|5|A|3784
7QWS|1|5|A|3785
7QWS|1|5|U|3786
7QWS|1|5|G|3787
7QWS|1|5|C|3788
7QWS|1|5|C|3789
7QWS|1|5|U|3790
7QWS|1|5|C|3791
7QWS|1|5|G|3792
*
7QWS|1|5|C|3808
7QWS|1|5|G|3809
7QWS|1|5|C|3810
7QWS|1|5|G|3811

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41