IL_7QWS_118
3D structure
- PDB id
- 7QWS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAG*CGUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QWS_118 not in the Motif Atlas
- Geometric match to IL_7RQB_082
- Geometric discrepancy: 0.2002
- The information below is about IL_7RQB_082
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7QWS|1|5|C|4243
7QWS|1|5|A|4244
7QWS|1|5|G|4245
*
7QWS|1|5|C|4263
7QWS|1|5|G|4264
7QWS|1|5|U|4265
7QWS|1|5|G|4266
7QWS|1|5|G|4267
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- Ribosomal_L18_c domain-containing protein
- Chain J
- Ribosomal protein L11
- Chain T
- 60S ribosomal protein L21
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