IL_7QWS_134

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCAU*AGGCG

Length

9 nucleotides

Bulged bases

7QWS|1|5|C|4720

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_134 not in the Motif Atlas

Geometric match to IL_5AOX_003

Geometric discrepancy: 0.2803

The information below is about IL_5AOX_003

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.4

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

45

Unit IDs

7QWS|1|5|C|4582
7QWS|1|5|C|4583
7QWS|1|5|A|4584
7QWS|1|5|U|4585
*
7QWS|1|5|A|4717
7QWS|1|5|G|4718
7QWS|1|5|G|4719
7QWS|1|5|C|4720
7QWS|1|5|G|4721

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain O

Ribosomal protein L13a