IL_7QWS_138

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUAUG*CGAAG

Length

11 nucleotides

Bulged bases

7QWS|1|5|U|4634, 7QWS|1|5|U|4636

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_138 not in the Motif Atlas

Geometric match to IL_5TBW_118

Geometric discrepancy: 0.2621

The information below is about IL_5TBW_118

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

7QWS|1|5|U|4632
7QWS|1|5|G|4633
7QWS|1|5|U|4634
7QWS|1|5|A|4635
7QWS|1|5|U|4636
7QWS|1|5|G|4637
*
7QWS|1|5|C|4662
7QWS|1|5|G|4663
7QWS|1|5|A|4664
7QWS|1|5|A|4665
7QWS|1|5|G|4666

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain W

Ribosomal protein L24

Chain d

Ribosomal protein L31