IL_7QWS_155

3D structure

PDB id

7QWS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGAG*CGAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWS_155 not in the Motif Atlas

Geometric match to IL_5TBW_135

Geometric discrepancy: 0.3058

The information below is about IL_5TBW_135

Detailed Annotation

Double sheared; A in syn

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

7QWS|1|5|A|5014
7QWS|1|5|G|5015
7QWS|1|5|A|5016
7QWS|1|5|G|5017
*
7QWS|1|5|C|5032
7QWS|1|5|G|5033
7QWS|1|5|A|5034
7QWS|1|5|U|5035

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19