IL_7RR5_006
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CUUAGUAA*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_006 not in the Motif Atlas
- Homologous match to IL_5TBW_006
- Geometric discrepancy: 0.1027
- The information below is about IL_5TBW_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7RR5|1|C1|C|82
7RR5|1|C1|U|83
7RR5|1|C1|U|84
7RR5|1|C1|A|85
7RR5|1|C1|G|86
7RR5|1|C1|U|87
7RR5|1|C1|A|88
7RR5|1|C1|A|89
*
7RR5|1|C1|U|97
7RR5|1|C1|G|98
7RR5|1|C1|A|99
7RR5|1|C1|A|100
7RR5|1|C1|G|101
7RR5|1|C1|C|102
7RR5|1|C1|G|103
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- 60S ribosomal protein L15-A
- Chain LQ
- 60S ribosomal protein L18-B
- Chain La
- 60S ribosomal protein L28
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