IL_7RR5_043
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GUUCCG*UGAC
- Length
- 10 nucleotides
- Bulged bases
- 7RR5|1|C1|C|1016, 7RR5|1|C1|C|1017
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_043 not in the Motif Atlas
- Homologous match to IL_5TBW_043
- Geometric discrepancy: 0.2618
- The information below is about IL_5TBW_043
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_71110.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7RR5|1|C1|G|1013
7RR5|1|C1|U|1014
7RR5|1|C1|U|1015
7RR5|1|C1|C|1016
7RR5|1|C1|C|1017
7RR5|1|C1|G|1018
*
7RR5|1|C1|U|1034
7RR5|1|C1|G|1035
7RR5|1|C1|A|1036
7RR5|1|C1|C|1037
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain LI
- RPL10 isoform 1
- Chain LJ
- RPL11B isoform 1
Coloring options: