IL_7RR5_101
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UUGA*UACA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_101 not in the Motif Atlas
- Homologous match to IL_5TBW_100
- Geometric discrepancy: 0.1493
- The information below is about IL_5TBW_100
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_73915.1
- Basepair signature
- cWW-L-R-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
7RR5|1|C1|U|2718
7RR5|1|C1|U|2719
7RR5|1|C1|G|2720
7RR5|1|C1|A|2721
*
7RR5|1|C1|U|2735
7RR5|1|C1|A|2736
7RR5|1|C1|C|2737
7RR5|1|C1|A|2738
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LD
- RPL5 isoform 1
- Chain LQ
- 60S ribosomal protein L18-B
- Chain LT
- 60S ribosomal protein L21-A
- Chain Lb
- RPL29 isoform 1
- Chain Lo
- 60S ribosomal protein L42-A
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