IL_7RR5_118
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UAAUU*ACCA
- Length
- 9 nucleotides
- Bulged bases
- 7RR5|1|C1|C|3092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_118 not in the Motif Atlas
- Homologous match to IL_5TBW_117
- Geometric discrepancy: 0.15
- The information below is about IL_5TBW_117
- Detailed Annotation
- Major groove minor groove platform with tHH
- Broad Annotation
- No text annotation
- Motif group
- IL_14592.1
- Basepair signature
- cWW-tHH-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
7RR5|1|C1|U|3047
7RR5|1|C1|A|3048
7RR5|1|C1|A|3049
7RR5|1|C1|U|3050
7RR5|1|C1|U|3051
*
7RR5|1|C1|A|3091
7RR5|1|C1|C|3092
7RR5|1|C1|C|3093
7RR5|1|C1|A|3094
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LB
- RPL3 isoform 1
- Chain LV
- 60S ribosomal protein L23-B
- Chain LW
- RPL24A isoform 1
Coloring options: