IL_7RYF_004
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GGGAG*CUUUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 7RYF|1|A|U|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYF_004 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.1719
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7RYF|1|A|G|88
7RYF|1|A|G|89
7RYF|1|A|G|90
7RYF|1|A|A|91
7RYF|1|A|G|92
*
7RYF|1|A|C|105
7RYF|1|A|U|106
7RYF|1|A|U|107
7RYF|1|A|U|108
7RYF|1|A|G|109
7RYF|1|A|A|110
7RYF|1|A|U|111
7RYF|1|A|C|112
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain T
- 50S ribosomal protein L24
- Chain X
- 50S ribosomal protein L29
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