IL_7RYG_181

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

UUGG*CUGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_181 not in the Motif Atlas

Geometric match to IL_402D_001

Geometric discrepancy: 0.2607

The information below is about IL_402D_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7RYG|1|A|U|1712
7RYG|1|A|U|1713
7RYG|1|A|G|1714
7RYG|1|A|G|1715
*
7RYG|1|A|C|1737
7RYG|1|A|U|1738
7RYG|1|A|G|1739
7RYG|1|A|A|1740

Current chains

Chain A

23S ribosomal RNA

Nearby chains