IL_7RYH_023

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GGG*UAAUC

Length

8 nucleotides

Bulged bases

7RYH|1|A|G|774, 7RYH|1|A|A|786, 7RYH|1|A|A|787

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_023 not in the Motif Atlas

Geometric match to IL_5TBW_033

Geometric discrepancy: 0.1119

The information below is about IL_5TBW_033

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_90991.8

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

7RYH|1|A|G|773
7RYH|1|A|G|774
7RYH|1|A|G|775
*
7RYH|1|A|U|785
7RYH|1|A|A|786
7RYH|1|A|A|787
7RYH|1|A|U|788
7RYH|1|A|C|789

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain R

50S ribosomal protein L22