3D structure

PDB id
7S0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
GAAGC*GUGAUAGC
Length
13 nucleotides
Bulged bases
7S0S|1|C|G|916, 7S0S|1|C|G|920
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S0S_021 not in the Motif Atlas
Geometric match to IL_5J7L_260
Geometric discrepancy: 0.1177
The information below is about IL_5J7L_260
Detailed Annotation
tHW-tHW cross-strand stack
Broad Annotation
No text annotation
Motif group
IL_54041.2
Basepair signature
cWW-L-R-L-R-tWH-L-cWW
Number of instances in this motif group
7

Unit IDs

7S0S|1|C|G|789
7S0S|1|C|A|790
7S0S|1|C|A|791
7S0S|1|C|G|792
7S0S|1|C|C|793
*
7S0S|1|C|G|914
7S0S|1|C|U|915
7S0S|1|C|G|916
7S0S|1|C|A|917
7S0S|1|C|U|918
7S0S|1|C|A|919
7S0S|1|C|G|920
7S0S|1|C|C|921

Current chains

Chain C
23S rRNA

Nearby chains

Chain F
50S ribosomal protein L4
Chain N
50S ribosomal protein L15

Coloring options:


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