IL_7S0S_042
3D structure
- PDB id
- 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GGAAAAG*CGAUAAUGUAGCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7S0S|1|C|U|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S0S_042 not in the Motif Atlas
- Geometric match to IL_4WF9_040
- Geometric discrepancy: 0.1115
- The information below is about IL_4WF9_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.4
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7S0S|1|C|G|1142
7S0S|1|C|G|1143
7S0S|1|C|A|1144
7S0S|1|C|A|1145
7S0S|1|C|A|1146
7S0S|1|C|A|1147
7S0S|1|C|G|1148
*
7S0S|1|C|C|1242
7S0S|1|C|G|1243
7S0S|1|C|A|1244
7S0S|1|C|U|1245
7S0S|1|C|A|1246
7S0S|1|C|A|1247
7S0S|1|C|U|1248
7S0S|1|C|G|1249
7S0S|1|C|U|1250
7S0S|1|C|A|1251
7S0S|1|C|G|1252
7S0S|1|C|C|1253
7S0S|1|C|G|1254
7S0S|1|C|G|1255
7S0S|1|C|G|1256
7S0S|1|C|G|1257
7S0S|1|C|C|1258
Current chains
- Chain C
- 23S rRNA
Nearby chains
- Chain 3
- ribosomal protein bL37
- Chain E
- 50S ribosomal protein L3
- Chain L
- 50S ribosomal protein L13
- Chain O
- 50S ribosomal protein L16
- Chain g
- 50S ribosomal protein L36
- Chain i
- 5S ribosomal RNA; 5S rRNA
Coloring options: