IL_7S0S_053

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_053 not in the Motif Atlas

Homologous match to IL_5J7L_292

Geometric discrepancy: 0.076

The information below is about IL_5J7L_292

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7S0S|1|C|C|1466
7S0S|1|C|U|1467
7S0S|1|C|A|1468
7S0S|1|C|A|1469
7S0S|1|C|G|1470
*
7S0S|1|C|C|1491
7S0S|1|C|G|1492
7S0S|1|C|A|1493
7S0S|1|C|U|1494
7S0S|1|C|G|1495

Current chains

Chain C

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L2

Chain e

50S ribosomal protein L34