IL_7S0S_062

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

7S0S|1|C|U|1641

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_062 not in the Motif Atlas

Homologous match to IL_4WF9_054

Geometric discrepancy: 0.2218

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7S0S|1|C|C|1638
7S0S|1|C|G|1639
7S0S|1|C|A|1640
7S0S|1|C|U|1641
7S0S|1|C|G|1642
*
7S0S|1|C|C|1797
7S0S|1|C|U|1798
7S0S|1|C|A|1799
7S0S|1|C|G|1800

Current chains

Chain C

23S rRNA

Nearby chains