3D structure

PDB id
7S0S (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CAUGG*UGAG
Length
9 nucleotides
Bulged bases
7S0S|1|C|U|1932
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S0S_074 not in the Motif Atlas
Geometric match to IL_5J7L_296
Geometric discrepancy: 0.2491
The information below is about IL_5J7L_296
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_58112.2
Basepair signature
cWW-cWW-L-R-cWW
Number of instances in this motif group
4

Unit IDs

7S0S|1|C|C|1930
7S0S|1|C|A|1931
7S0S|1|C|U|1932
7S0S|1|C|G|1933
7S0S|1|C|G|1934
*
7S0S|1|C|U|1960
7S0S|1|C|G|1961
7S0S|1|C|A|1962
7S0S|1|C|G|1963

Current chains

Chain C
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1175 s