IL_7S0S_082

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UUAAG*UUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_082 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1816

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

7S0S|1|C|U|2068
7S0S|1|C|U|2069
7S0S|1|C|A|2070
7S0S|1|C|A|2071
7S0S|1|C|G|2072
*
7S0S|1|C|U|2111
7S0S|1|C|U|2112
7S0S|1|C|A|2113
7S0S|1|C|A|2114
7S0S|1|C|G|2115

Current chains

Chain C

23S rRNA

Nearby chains