IL_7S0S_137

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UUUG*CUGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_137 not in the Motif Atlas

Geometric match to IL_8GLP_339

Geometric discrepancy: 0.3024

The information below is about IL_8GLP_339

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7S0S|1|C|U|2330
7S0S|1|C|U|2331
7S0S|1|C|U|2332
7S0S|1|C|G|2333
*
7S0S|1|C|C|2402
7S0S|1|C|U|2403
7S0S|1|C|G|2404
7S0S|1|C|A|2405

Current chains

Chain C

23S rRNA

Nearby chains