IL_7S1H_008
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GG*UGC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1H_008 not in the Motif Atlas
- Geometric match to IL_5J7L_352
- Geometric discrepancy: 0.3731
- The information below is about IL_5J7L_352
- Detailed Annotation
- Major groove intercalation
- Broad Annotation
- Major groove intercalation
- Motif group
- IL_66635.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 27
Unit IDs
7S1H|1|C|G|75
7S1H|1|C|G|76
*
7S1H|1|C|U|93
7S1H|1|C|G|94
7S1H|1|C|C|95
Current chains
- Chain C
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: