IL_7S1H_027

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7S1H|1|C|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1H_027 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0824

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

7S1H|1|C|C|569
7S1H|1|C|G|570
7S1H|1|C|U|571
7S1H|1|C|A|572
7S1H|1|C|A|573
7S1H|1|C|A|574
7S1H|1|C|G|575
*
7S1H|1|C|C|880
7S1H|1|C|G|881

Current chains

Chain C

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S8

Chain t

30S ribosomal protein S12

Chain y

30S ribosomal protein S17