IL_7S1H_037

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1H_037 not in the Motif Atlas

Homologous match to IL_4LFB_032

Geometric discrepancy: 0.0563

The information below is about IL_4LFB_032

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7S1H|1|C|G|774
7S1H|1|C|G|775
7S1H|1|C|G|776
7S1H|1|C|A|777
7S1H|1|C|G|778
*
7S1H|1|C|U|804
7S1H|1|C|C|805

Current chains

Chain C

16S rRNA

Nearby chains

Chain I

Large subunit ribosomal RNA; LSU rRNA

Chain K

50S ribosomal protein L2

Chain r

30S ribosomal protein S11