IL_7S1H_054
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7S1H|1|C|U|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1H_054 not in the Motif Atlas
- Geometric match to IL_4LFB_050
- Geometric discrepancy: 0.1298
- The information below is about IL_4LFB_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7S1H|1|C|C|1158
7S1H|1|C|U|1159
7S1H|1|C|G|1160
7S1H|1|C|C|1161
*
7S1H|1|C|G|1175
7S1H|1|C|A|1176
7S1H|1|C|G|1177
7S1H|1|C|G|1178
7S1H|1|C|A|1179
7S1H|1|C|A|1180
7S1H|1|C|G|1181
Current chains
- Chain C
- 16S rRNA
Nearby chains
- Chain D
- 30S ribosomal protein S2
- Chain p
- 30S ribosomal protein S9
Coloring options: