IL_7S1H_056
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GAAG*CGGACC
- Length
- 10 nucleotides
- Bulged bases
- 7S1H|1|C|A|1257, 7S1H|1|C|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1H_056 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.1109
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7S1H|1|C|G|1255
7S1H|1|C|A|1256
7S1H|1|C|A|1257
7S1H|1|C|G|1258
*
7S1H|1|C|C|1277
7S1H|1|C|G|1278
7S1H|1|C|G|1279
7S1H|1|C|A|1280
7S1H|1|C|C|1281
7S1H|1|C|C|1282
Current chains
- Chain C
- 16S rRNA
Nearby chains
- Chain E
- 30S ribosomal protein S3
- Chain p
- 30S ribosomal protein S9
- Chain q
- 30S ribosomal protein S10
- Chain v
- 30S ribosomal protein S14
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