IL_7S1H_106
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GAAG*CGGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1H_106 not in the Motif Atlas
- Homologous match to IL_5J7L_283
- Geometric discrepancy: 0.1162
- The information below is about IL_5J7L_283
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7S1H|1|I|G|1038
7S1H|1|I|A|1039
7S1H|1|I|A|1040
7S1H|1|I|G|1041
*
7S1H|1|I|C|1114
7S1H|1|I|G|1115
7S1H|1|I|G|1116
7S1H|1|I|C|1117
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain O
- 50S ribosomal protein L6
- Chain U
- 50S ribosomal protein L16
- Chain d
- 50S ribosomal protein L25
- Chain m
- 50S ribosomal protein L36
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