3D structure

PDB id
7S1H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
GUGUAGGAUAG*CC
Length
13 nucleotides
Bulged bases
7S1H|1|I|U|2111, 7S1H|1|I|U|2118
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S1H_153 not in the Motif Atlas
Geometric match to IL_3IGI_013
Geometric discrepancy: 0.2721
The information below is about IL_3IGI_013
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_42626.2
Basepair signature
cWW-cWW
Number of instances in this motif group
14

Unit IDs

7S1H|1|I|G|2110
7S1H|1|I|U|2111
7S1H|1|I|G|2112
7S1H|1|I|U|2113
7S1H|1|I|A|2114
7S1H|1|I|G|2115
7S1H|1|I|G|2116
7S1H|1|I|A|2117
7S1H|1|I|U|2118
7S1H|1|I|A|2119
7S1H|1|I|G|2120
*
7S1H|1|I|C|2178
7S1H|1|I|C|2179

Current chains

Chain I
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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