IL_7S1H_153
3D structure
- PDB id
- 7S1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic linezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GUGUAGGAUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- 7S1H|1|I|U|2111, 7S1H|1|I|U|2118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1H_153 not in the Motif Atlas
- Geometric match to IL_3IGI_013
- Geometric discrepancy: 0.2721
- The information below is about IL_3IGI_013
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
7S1H|1|I|G|2110
7S1H|1|I|U|2111
7S1H|1|I|G|2112
7S1H|1|I|U|2113
7S1H|1|I|A|2114
7S1H|1|I|G|2115
7S1H|1|I|G|2116
7S1H|1|I|A|2117
7S1H|1|I|U|2118
7S1H|1|I|A|2119
7S1H|1|I|G|2120
*
7S1H|1|I|C|2178
7S1H|1|I|C|2179
Current chains
- Chain I
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: