IL_7S1J_170
3D structure
- PDB id
- 7S1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7S1J|1|I|U|2689, 7S1J|1|I|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1J_170 not in the Motif Atlas
- Homologous match to IL_5J7L_348
- Geometric discrepancy: 0.0759
- The information below is about IL_5J7L_348
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
7S1J|1|I|U|2687
7S1J|1|I|G|2688
7S1J|1|I|U|2689
7S1J|1|I|U|2690
7S1J|1|I|C|2691
*
7S1J|1|I|G|2718
7S1J|1|I|G|2719
7S1J|1|I|U|2720
7S1J|1|I|A|2721
7S1J|1|I|G|2722
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain V
- 50S ribosomal protein L17
- Chain X
- 50S ribosomal protein L19
Coloring options: