IL_7SAE_043

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7SAE|1|A|U|1251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_043 not in the Motif Atlas

Homologous match to IL_7A0S_043

Geometric discrepancy: 0.1272

The information below is about IL_7A0S_043

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

7SAE|1|A|C|1248
7SAE|1|A|U|1249
7SAE|1|A|G|1250
7SAE|1|A|U|1251
7SAE|1|A|G|1252
7SAE|1|A|A|1253
7SAE|1|A|A|1254
7SAE|1|A|G|1255
*
7SAE|1|A|U|1274
7SAE|1|A|G|1275
7SAE|1|A|G|1276
7SAE|1|A|A|1277
7SAE|1|A|G|1278

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain Q

50S ribosomal protein L20