IL_7SFR_130
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UAUCAG*CGACGACG
- Length
- 14 nucleotides
- Bulged bases
- 7SFR|1|a|U|243, 7SFR|1|a|C|279
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_130 not in the Motif Atlas
- Geometric match to IL_4V88_402
- Geometric discrepancy: 0.2042
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
7SFR|1|a|U|241
7SFR|1|a|A|242
7SFR|1|a|U|243
7SFR|1|a|C|244
7SFR|1|a|A|245
7SFR|1|a|G|246
*
7SFR|1|a|C|276
7SFR|1|a|G|277
7SFR|1|a|A|278
7SFR|1|a|C|279
7SFR|1|a|G|280
7SFR|1|a|A|281
7SFR|1|a|C|282
7SFR|1|a|G|283
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: