IL_7SSD_164
3D structure
- PDB id
- 7SSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mid translocation intermediate with EF-G bound with GDP (Structure IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAG*CGGACC
- Length
- 10 nucleotides
- Bulged bases
- 7SSD|1|3|A|1257, 7SSD|1|3|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSD_164 not in the Motif Atlas
- Homologous match to IL_5J7L_055
- Geometric discrepancy: 0.2869
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7SSD|1|3|G|1255
7SSD|1|3|A|1256
7SSD|1|3|A|1257
7SSD|1|3|G|1258
*
7SSD|1|3|C|1277
7SSD|1|3|G|1278
7SSD|1|3|G|1279
7SSD|1|3|A|1280
7SSD|1|3|C|1281
7SSD|1|3|C|1282
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain H
- 30S ribosomal protein S3
- Chain O
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
Coloring options: