IL_7SSN_066
3D structure
- PDB id
- 7SSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGCAAAC*GGACGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7SSN|1|1|A|1801, 7SSN|1|1|C|1816, 7SSN|1|1|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SSN_066 not in the Motif Atlas
- Homologous match to IL_5J7L_313
- Geometric discrepancy: 0.0858
- The information below is about IL_5J7L_313
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.5
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7SSN|1|1|U|1798
7SSN|1|1|G|1799
7SSN|1|1|C|1800
7SSN|1|1|A|1801
7SSN|1|1|A|1802
7SSN|1|1|A|1803
7SSN|1|1|C|1804
*
7SSN|1|1|G|1813
7SSN|1|1|G|1814
7SSN|1|1|A|1815
7SSN|1|1|C|1816
7SSN|1|1|G|1817
7SSN|1|1|U|1818
7SSN|1|1|A|1819
7SSN|1|1|U|1820
7SSN|1|1|A|1821
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- 50S ribosomal protein L2
Coloring options: