IL_7SUK_037

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

CUCA*UUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SUK_037 not in the Motif Atlas

Geometric match to IL_3TZR_003

Geometric discrepancy: 0.2053

The information below is about IL_3TZR_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7SUK|1|8|C|1675
7SUK|1|8|U|1676
7SUK|1|8|C|1677
7SUK|1|8|A|1678
*
7SUK|1|8|U|1723
7SUK|1|8|U|1724
7SUK|1|8|U|1725
7SUK|1|8|G|1726

Current chains

Chain 8

18S pre-rRNA

Nearby chains