IL_7SUK_044

3D structure

PDB id

7SUK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GUG*CUGC

Length

7 nucleotides

Bulged bases

7SUK|1|L0|U|129

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SUK_044 not in the Motif Atlas

Geometric match to IL_8GLP_043

Geometric discrepancy: 0.3976

The information below is about IL_8GLP_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42997.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

23

Unit IDs

7SUK|1|L0|G|115
7SUK|1|L0|U|116
7SUK|1|L0|G|117
*
7SUK|1|L0|C|128
7SUK|1|L0|U|129
7SUK|1|L0|G|130
7SUK|1|L0|C|131

Current chains

Chain L0

5' ETS

Nearby chains

Chain LJ

U3 small nucleolar RNA-associated protein 15

Chain SU

Nucleolar complex protein 4