IL_8GLP_043
3D structure
- PDB id
- 8GLP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.67 Å
Loop
- Sequence
- CUC*GCCCG
- Length
- 8 nucleotides
- Bulged bases
- 8GLP|1|L5|C|1214, 8GLP|1|L5|C|1215
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8GLP_043 not in the Motif Atlas
- Geometric match to IL_4WF9_034
- Geometric discrepancy: 0.3106
- The information below is about IL_4WF9_034
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8GLP|1|L5|C|1082
8GLP|1|L5|U|1083
8GLP|1|L5|C|1084
*
8GLP|1|L5|G|1213
8GLP|1|L5|C|1214
8GLP|1|L5|C|1215
8GLP|1|L5|C|1216
8GLP|1|L5|G|1217
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L7
- Chain Lb
- 60S ribosomal protein L29
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