IL_7TOO_132
3D structure
- PDB id
- 7TOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUA*UUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 7TOO|1|A25S|G|3377
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOO_132 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.1308
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7TOO|1|A25S|G|3328
7TOO|1|A25S|U|3329
7TOO|1|A25S|A|3330
*
7TOO|1|A25S|U|3373
7TOO|1|A25S|U|3374
7TOO|1|A25S|A|3375
7TOO|1|A25S|A|3376
7TOO|1|A25S|G|3377
7TOO|1|A25S|C|3378
Current chains
- Chain A25S
- 25S rRNA
Nearby chains
- Chain AL03
- RPL3 isoform 1
- Chain AL24
- RPL24A isoform 1
- Chain AL31
- 60S ribosomal protein L31-A
Coloring options: