IL_7TOQ_037
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACU*GGAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOQ_037 not in the Motif Atlas
- Geometric match to IL_6CZR_361
- Geometric discrepancy: 0.325
- The information below is about IL_6CZR_361
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_56539.1
- Basepair signature
- cWW-cWW-cSH-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
7TOQ|1|A18S|A|802
7TOQ|1|A18S|C|803
7TOQ|1|A18S|U|804
*
7TOQ|1|A18S|G|859
7TOQ|1|A18S|G|860
7TOQ|1|A18S|A|861
7TOQ|1|A18S|A|862
7TOQ|1|A18S|U|863
Current chains
- Chain A18S
- 18S rRNA
Nearby chains
- Chain AS04
- 40S ribosomal protein S4
- Chain AS07
- eS7
- Chain AS11
- 40S ribosomal protein S11
- Chain AS22
- 40S ribosomal protein S15a
- Chain AS23
- 40S ribosomal protein S23
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