IL_7TOQ_111

3D structure

PDB id

7TOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7TOQ|1|A25S|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOQ|1|A25S|A|466
7TOQ|1|A25S|U|467
7TOQ|1|A25S|U|468
7TOQ|1|A25S|C|469
7TOQ|1|A25S|A|470
7TOQ|1|A25S|A|471
7TOQ|1|A25S|C|472
*
7TOQ|1|A25S|G|682
7TOQ|1|A25S|C|683
7TOQ|1|A25S|G|684
7TOQ|1|A25S|C|685
7TOQ|1|A25S|A|686
7TOQ|1|A25S|U|687
7TOQ|1|A25S|U|688
7TOQ|1|A25S|U|689

Current chains

Chain A25S

28S rRNA

Nearby chains

Chain AL06

60S ribosomal protein L6

Chain EL28

60S ribosomal protein L28