IL_7TOQ_147
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7TOQ|1|A25S|G|1625, 7TOQ|1|A25S|A|1637, 7TOQ|1|A25S|A|1638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOQ_147 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.0897
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7TOQ|1|A25S|G|1624
7TOQ|1|A25S|G|1625
7TOQ|1|A25S|G|1626
*
7TOQ|1|A25S|U|1636
7TOQ|1|A25S|A|1637
7TOQ|1|A25S|A|1638
7TOQ|1|A25S|U|1639
7TOQ|1|A25S|C|1640
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL02
- uL2
- Chain AL15
- 60S ribosomal protein L15
- Chain AL17
- 60S ribosomal protein L17
- Chain AL37
- 60S ribosomal protein L37
- Chain PR
- PR20, ALS/FTD dipeptide repeat protein
Coloring options: