IL_7TOR_199

3D structure

PDB id

7TOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOR|1|A28S|C|3708
7TOR|1|A28S|U|3709
7TOR|1|A28S|G|3710
7TOR|1|A28S|A|3711
7TOR|1|A28S|A|3712
7TOR|1|A28S|U|3713
7TOR|1|A28S|G|3714
*
7TOR|1|A28S|C|3739
7TOR|1|A28S|G|3740
7TOR|1|A28S|C|3741
7TOR|1|A28S|G|3742

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain A18S

Small subunit ribosomal RNA; SSU rRNA

Chain AL02

60S ribosomal protein L8

Chain ETRN

Transfer RNA; tRNA