IL_7TOR_243
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCCC*GUCA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_243 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.2463
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7TOR|1|A28S|U|4885
7TOR|1|A28S|C|4886
7TOR|1|A28S|C|4887
7TOR|1|A28S|C|4888
*
7TOR|1|A28S|G|4931
7TOR|1|A28S|U|4932
7TOR|1|A28S|C|4933
7TOR|1|A28S|A|4934
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL06
- 60S ribosomal protein L6
- Chain AL14
- 60S ribosomal protein L14
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