IL_7TOR_249
3D structure
- PDB id
- 7TOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUU*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7TOR|1|A28S|G|5049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOR_249 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.1792
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7TOR|1|A28S|G|5000
7TOR|1|A28S|U|5001
7TOR|1|A28S|U|5002
*
7TOR|1|A28S|G|5045
7TOR|1|A28S|U|5046
7TOR|1|A28S|C|5047
7TOR|1|A28S|A|5048
7TOR|1|A28S|G|5049
7TOR|1|A28S|C|5050
Current chains
- Chain A28S
- 28S rRNA
Nearby chains
- Chain AL03
- 60S ribosomal protein L3
- Chain AL24
- Ribosomal protein L24
- Chain AL31
- 60S ribosomal protein L31
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