IL_7TOS_033
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 7TOS|1|16S|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_033 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.0768
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7TOS|1|16S|U|662
7TOS|1|16S|A|663
7TOS|1|16S|G|664
7TOS|1|16S|A|665
7TOS|1|16S|G|666
*
7TOS|1|16S|U|740
7TOS|1|16S|G|741
7TOS|1|16S|G|742
7TOS|1|16S|A|743
Current chains
- Chain 16S
- 16S ribosomal RNA
Nearby chains
- Chain S06
- 30S ribosomal protein S6, non-modified isoform
- Chain S15
- 30S ribosomal protein S15
- Chain S18
- 30S ribosomal protein S18
Coloring options: